Genome Sequence Data
Data Type: genome_sequence
Primary Key: sequence_id
Attributes
-
_version_
(
number)
-
accession
(
string)
-
chromosome
(
case insensitive string)
-
date_inserted
(
date)
-
date_modified
(
date)
-
description
(
case insensitive string)
-
gc_content
(
number)
-
genome_id
(
string)
-
genome_name
(
case insensitive string)
-
gi
(
integer)
-
length
(
integer)
-
mol_type
(
case insensitive string)
-
owner
(
string)
-
p2_sequence_id
(
integer)
-
plasmid
(
case insensitive string)
-
public
(
boolean)
-
release_date
(
date)
-
segment
(
case insensitive string)
-
sequence
(
)
-
sequence_id
*
(
string)
-
sequence_md5
(
string)
-
sequence_status
(
string)
-
sequence_type
(
case insensitive string)
-
taxon_id
(
integer)
-
topology
(
case insensitive string)
-
user_read
(
array of strings)
-
user_write
(
array of strings)
-
version
(
integer)
API
GET :sequence_id
Retrieve a genome_sequence data object by sequence_id
EXAMPLE
https://www.bv-brc.org/api/genome_sequence/170673.13.con.0100
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QUERY :query
Query for genome_sequence data objects with an RQL Query
Return Formats
Requests may include an HTTP ACCEPT header from this list to transform the data into the requested type.
-
application/json - Returns results as an array of JSON objects
-
application/solr+json - Results results in SOLR JSON response format
-
text/csv - Returns results in Comma Separated values (CSV) format. Columns are separated by ','. Multi-value columns are separated by ';'. Rows are separated by new line
-
text/tsv - Returns results in Tab Separated values (TSV) format. Columns are separated by a tab. Multi-value columns are separated by ';'. Rows are separated by new line
-
application/vnd.openxmlformats - Returns objects as an MS Excel document
EXAMPLE
- Query for genome_sequence data objects with a sequence_id equal to 170673.13.con.0100. Return results as a JSON Array.
https://www.bv-brc.org/api/genome_sequence/?eq(sequence_id,170673.13.con.0100)
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