Protein Structure Data
Data Type: protein_structure
Primary Key: pdb_id
Attributes
-
alignments
(
array of strings)
-
authors
(
array of strings)
-
date_inserted
(
date)
-
date_modified
(
date)
-
feature_id
(
string)
-
file_path
(
string)
-
gene
(
array of strings)
-
genome_id
(
string)
-
institution
(
string)
-
method
(
array of strings)
-
organism_name
(
array of case insensitive strings)
-
patric_id
(
string)
-
pdb_id
*
(
string)
-
pmid
(
array of strings)
-
product
(
array of strings)
-
release_date
(
date)
-
resolution
(
string)
-
sequence
(
array of strings)
-
sequence_md5
(
array of strings)
-
taxon_id
(
array of integers)
-
taxon_lineage_ids
(
array of strings)
-
taxon_lineage_names
(
array of strings)
-
title
(
case insensitive string)
-
uniprotkb_accession
(
array of strings)
API
GET :pdb_id
Retrieve a protein_structure data object by pdb_id
EXAMPLE
https://www.bv-brc.org/api/protein_structure/103L
Try It!
QUERY :query
Query for protein_structure data objects with an RQL Query
Return Formats
Requests may include an HTTP ACCEPT header from this list to transform the data into the requested type.
-
application/json - Returns results as an array of JSON objects
-
application/solr+json - Results results in SOLR JSON response format
-
text/csv - Returns results in Comma Separated values (CSV) format. Columns are separated by ','. Multi-value columns are separated by ';'. Rows are separated by new line
-
text/tsv - Returns results in Tab Separated values (TSV) format. Columns are separated by a tab. Multi-value columns are separated by ';'. Rows are separated by new line
-
application/vnd.openxmlformats - Returns objects as an MS Excel document
EXAMPLE
- Query for protein_structure data objects with a pdb_id equal to 103L. Return results as a JSON Array.
https://www.bv-brc.org/api/protein_structure/?eq(pdb_id,103L)
Try It!