.. _cli::p3-fasta-md5: ############ p3-fasta-md5 ############ ************************************************ Compute the Whole-Sequence MD5 from a FASTA File ************************************************ .. code-block:: perl p3-fasta-md5.pl [options] This script computes the whole-genome MD5 checksum from a genome's FASTA file. This can be used to determine if two genomes have identical DNA. Parameters ========== There are no positional parameters. The standard input can be overridden using the options in :ref:`cli-input-options`. The input should be a DNA FASTA file. The checksum will be produced on the standard output.