Data Sources and Protocols
==========================

BV-BRC uses standardized protocols for collecting, processing, annotating, and integrating bacterial and viral data from multiple sources. The links below provide detailed descriptions for each major data type.

.. toctree::
   :maxdepth: 1
   :caption: Genomes:

   genome_annotation
   antimicrobial_resistance

..
   genomes
   genomic_features
   pathways
   protein_families
   specialty_genes
   transcriptomics