BV-BRC Documentation

Help Resources:

  • Overview
  • Quick Start
  • Data Sources and Protocols
  • Quick Reference Guides
  • Tutorials
    • Genomics
      • Genome Assembly Service
      • Genome Annotation Service
      • Comparative Systems Tool
      • Comprehensive Genome Analysis (CGA) Service: Genome Assembly/Annotation
      • BLAST (Homology) Service
      • SARS-CoV-2 Genome Assembly and Annotation Service
      • Similar Genome Finder Service
      • Metadata-driven Comparative Analysis Tool (meta-CATS) Tutorial
      • Phylogenetic Tree Service
      • Genome Alignment
      • Primer Design Tutorial
      • Variation - SNP Analysis Service
      • Tn-Seq Analysis Service
    • Protein Tools
      • MSA and SNP/Variation Analysis Service
      • Building Phylogenetic Trees (Gene Trees) Tutorial
      • Proteome Comparison Service
    • Metagenomics
      • Metagenomic Read Mapping
      • Taxonomic Classification Service
      • Metagenomic Binning Service
    • Transcriptomics
      • Expression Import
      • RNA-Seq Analysis
    • Utilities
      • ID Mapper
      • FastQ Utilities Service
  • Command Line Interface
  • Test Procedures
  • Webinars

Other Information:

  • News and Announcements
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BV-BRC Documentation
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  • Tutorials
  • Edit on GitHub

Tutorials¶

The BV-BRC website provides the capability to perform a broad array of analyses. These Tutorials provide step-by-step instructions for performing common tasks and analyses using the website. The examples are chosen to also provide a relevant biological context to help deomonstrate utility and interpretation of the data and results.

Genomics¶

  • Genome Assembly Service
  • Genome Annotation Service
  • Comparative Systems Tool
  • Comprehensive Genome Analysis (CGA) Service: Genome Assembly/Annotation
  • BLAST (Homology) Service
  • SARS-CoV-2 Genome Assembly and Annotation Service
  • Similar Genome Finder Service
  • Metadata-driven Comparative Analysis Tool (meta-CATS) Tutorial
  • Phylogenetic Tree Service
  • Genome Alignment
  • Primer Design Tutorial
  • Variation - SNP Analysis Service
  • Tn-Seq Analysis Service

Protein Tools¶

  • MSA and SNP/Variation Analysis Service
  • Building Phylogenetic Trees (Gene Trees) Tutorial
  • Proteome Comparison Service

Metagenomics¶

  • Metagenomic Read Mapping
  • Taxonomic Classification Service
  • Metagenomic Binning Service

Transcriptomics¶

  • Expression Import
  • RNA-Seq Analysis

Utilities¶

  • ID Mapper
  • FastQ Utilities Service
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