ORGANISMS

Bacterial Pathogens

Acinetobacter Francisella

Bacillus Helicobacter

Bartonella Listeria

Borreliella Mycobacterium

Brucella Pseudomonas

Burkholderia Rickettsia

Campylobacter Salmonella

Chlamydia Shigella

Clostridium Staphylococcus

Coxiella Streptococcus

Ehrlichia Vibrio

Escherichia Yersinia

All Bacteria All Archaea All Viruses Eukaryotic Hosts

Viral Families

Adenoviridae Orthomyxoviridae

Asfarviridae Paramyxoviridae

Bunyavirales Parvoviridae

Caliciviridae Picornaviridae

Coronaviridae Pneumoviridae

Filoviridae Polyomaviridae

Flaviviridae Poxviridae

Hepadnaviridae Reovirales

Hepeviridae Rhabdoviridae

Herpesvirales Togaviridae

Featured Viruses

Bacteriophages Lassa virus

Dengue virus Measles virus

Ebola virus Monkeypox virus

Enteroviruses SARS-CoV-2

Hepatitis C virus Zika virus

Influenza A virus

SEARCHES

Advanced Search

Specialty Genes

Domains and Motifs

Protein Structures

Sequence Feature Variant Types

TOOLS & SERVICES

Genomics

Genome Assembly

Genome Annotation

Comprehensive Genome Analysis (B)

Similar Genome Finder

Genome Alignment

Variation Analysis

Tn-Seq Analysis

Phylogenomics

Bacterial Genome Tree

Viral Genome Tree

Gene/Protein Tree

Core Genome MLST

Whole Genome SNP Analysis

Protein Tools

MSA and SNP Analysis

Proteome Comparison

Protein Family Sorter

Comparative Systems

Metagenomics

Taxonomic Classification

Metagenomic Binning

Metagenomic Read Mapping

Transcriptomics

RNA-Seq Analysis

Expression Import

Utilities

Fastq Utilities

Viral Tools

SARS-CoV-2 Genome Analysis

SARS-CoV-2 Wastewater Analysis

Influenza Sequence Submission

Influenza HA Subtype Conversion

Subspecies Classification

Outbreak Tracker

Measles 2025

Mpox 2024

Influenza H5N1 2024

SARS-CoV-2

WORKSPACES

Please sign in to view your workspaces.

Public Workspaces

BV-BRC Workshop

My Jobs

My Genomes

HELP

Documentation Website

Updates and Reports

News and Announcements

Reports and Analysis

Help Resources

Data Sources & Protocols

Quick Reference Guides

Command Line Interface

Instructional Videos

Information for PATRIC Users

Information for IRD/ViPR Users

System Documentation

System Architecture

Test Procedures

ABOUT

Related Resources

Register Sign In

Signed in as

Account Settings

ORGANISMS

All Bacteria All Archaea All Viruses Eukaryotic Hosts

Bacterial Pathogens

Acinetobacter Bacillus Bartonella Borreliella Brucella Burkholderia Campylobacter Chlamydia Clostridium Coxiella Ehrlichia Escherichia Francisella Helicobacter Listeria Mycobacterium Pseudomonas Rickettsia Salmonella Shigella Staphylococcus Streptococcus Vibrio Yersinia

Viral Families

Adenoviridae Asfarviridae Bunyavirales Caliciviridae Coronaviridae Filoviridae Flaviviridae Hepadnaviridae Hepeviridae Herpesvirales Orthomyxoviridae Paramyxoviridae Parvoviridae Picornaviridae Pneumoviridae Polyomaviridae Poxviridae Reovirales Rhabdoviridae Togaviridae

Featured Viruses

Bacteriophages Dengue virus Ebola virus Enteroviruses Hepatitis C virus Influenza A virus Lassa virus Measles virus Monkeypox virus SARS-CoV-2 Zika virus

SEARCHES

Specialty Genes

Domains and Motifs

Protein Structures

Sequence Feature Variant Types

TOOLS & SERVICES

Genomics

Genome Assembly

Genome Annotation

Comprehensive Genome Analysis (B)

Similar Genome Finder

Genome Alignment

Variation Analysis

Tn-Seq Analysis

Phylogenomics

Bacterial Genome Tree

Viral Genome Tree

Gene/Protein Tree

Protein Tools

MSA and SNP Analysis

Proteome Comparison

Protein Family Sorter

Comparative Systems

Metagenomics

Taxonomic Classification

Metagenomic Binning

Metagenomic Read Mapping

Transcriptomics

RNA-Seq Analysis

Expression Import

Utilities

Fastq Utilities

Viral Tools

SARS-CoV-2 Genome Analysis

SARS-CoV-2 Wastewater Analysis

Influenza Sequence Submission

Influenza HA Subtype Conversion

Subspecies Classification

OUTBREAK TRACKER

Influenza H5N1 2024

WORKSPACES

Please sign in to view your workspaces.

Public Workspaces

BV-BRC Workshop

HELP

Documentation Website

Updates and Reports

News and Announcements

Reports and Analysis

Help Resources

Data Sources & Protocols

Quick Reference Guides

Tutorials

Command Line Interface

Instructional Videos

Webinars

Information for PATRIC Users

Information for IRD/ViPR Users

System Documentation

System Architecture

Test Procedures

ABOUT

Related Resources

Publications

A complete list of publications by BV-BRC and its predecessor resources (PATRIC, NMPDR, IRD, ViPR) can be found at Google Scholar.

BRC Program

Funding Statement

This project has been funded in whole or in part with Federal funds from the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under Grant No. U24AI183849, awarded to the University of Chicago.

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