All Advanced Searches
Taxa
Search for taxa using taxon id or name and jump to taxon level pages to access relevant data and analysis tools.
Genomes
Search for microbial or viral genomes (or genome segments for segmented viruses) of interest using generic keywords, genome id/name, pathogen group, various metadata attributes, or database identifiers.
Strains
Search for strains of interest for segmented viruses using generic keywords, genome id/name, pathogen group, various metadata attributes, or presence of select segments.
Features
Search for proteins of interest (resulting from CDS and mature peptide features) using generic keywords, pathogen group, various genome metadata attributes, protein product, or database identifiers.
Proteins
Search for proteins of interest (resulting from CDS and mature peptide features) using generic keywords, pathogen group, various genome metadata attributes, protein product, or database identifiers.
Specialty Genes
Search for specialty genes annotated in microbial genomes, such as antimicrobial resistance genes, virulence factors, essential genes, drug targets, and human homologs. Search using generic keywords, pathogen group, property, source database, or protein product.
Domains and Motifs
Search for protein domains and motifs of interest using generic keywords, pathogen group, taxon name, source database, domain id or name.
Epitopes
Search for epitopes of interest using generic keywords, pathogen group or taxon name, epitope id, type, sequence, protein accession or product, or assay results.
Protein Structures
Search for experimentally characterized protein structures of interest using generic keywords, pathogen group or taxon name, PDB id, description, or protein product.
Pathways
Search for metabolic pathways annotated in microbial genomes using generic keywords, pathogen group or taxon name, pathway id, name, product, or EC number.
Subsystems
Search for subsystems annotated in microbial genomes using generic keywords, pathogen group or taxon name, subsystem id, name, or functional role.
Surveillance
Search for surveillance data for select viral families using generic keywords, pathogen test type, test result, host, country, or collection year.
Serology
Search for serology data for select viral families using generic keywords, test type, test result, host, country, or collection year.